Targeted sequencing of Canavalia lineata - SRA

SRX22404332: Targeted sequencing of Canavalia lineata
1 ILLUMINA (Illumina HiSeq 3000) run: 2.1M spots, 629M bases, 246.7Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 1

PRJNA1021556 • SRP470581 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Canavalia lineata

SAMN37561752 • SRS19441009 • All experiments • All runs

Organism: Canavalia lineata

Library:

Name: f3bae143-1944-45a1-ad2c-3b70d1109bfa

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 2.1M spots, 629M bases, 246.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR26704749	2,096,672	629M	246.7Mb	2023-11-07

ID:: 30386800

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